About: http://hub.abes.fr/oup/periodical/nar/2003/volume_31/issue_13/w

Documentation

scienceplus.abes.fr version Bêta

scienceplus.abes.fr | explorer

À propos de : http://hub.abes.fr/oup/periodical/nar/2003/volume_31/issue_13/w Goto Sponge NotDistinct Permalink

Attributs	Valeurs
type	work Issue
Is Part Of	http://hub.abes.fr/oup/periodical/nar/2003/volume_31
has manifestation of work	http://hub.abes.fr/oup/periodical/nar/2003/volume_31/issue_13/m/web http://hub.abes.fr/oup/periodical/nar/2003/volume_31/issue_13/m/print
Date Copyrighted	2003
issue	13
is Is Part Of of	Building protein diagrams on the web with the residue-based diagram editor RbDe ExPASy: the proteomics server for in-depth protein knowledge and analysis Phydbac (phylogenomic display of bacterial genes): an interactive resource for the annotation of bacterial genomes mreps: efficient and flexible detection of tandem repeats in DNA TRACTS: a program to map oligopurine.oligopyrimidine and other binary DNA tracts Update on XplorMed: a web server for exploring scientific literature LGA: a method for finding 3D similarities in protein structures SLAM web server for comparative gene finding and alignment EUGÈNE'HOM: a generic similarity-based gene finder using multiple homologous sequences NRSAS: Nuclear Receptor Structure Analysis Servers CODEHOP (COnsensus-DEgenerate Hybrid Oligonucleotide Primer) PCR primer design WEB-THERMODYN: sequence analysis software for profiling DNA helical stability Regulatory Sequence Analysis Tools Servers for sequence-structure relationship analysis and prediction iSPOT: a web tool to infer the interaction specificity of families of protein modules Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays CRP: Cleavage of Radiolabeled Phosphoproteins PROTINFO: secondary and tertiary protein structure prediction ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins WebFEATURE: an interactive web tool for identifying and visualizing functional sites on macromolecular structures META-PP: single interface to crucial prediction servers RNA-related tools on the Bielefeld Bioinformatics Server EVA: evaluation of protein structure prediction servers CLOURE: Clustal Output Reformatter, a program for reformatting ClustalX/ClustalW outputs for SNP analysis and molecular systematics Annotation in three dimensions. PINTS: Patterns in Non-homologous Tertiary Structures The PredictProtein server NORSp: predictions of long regions without regular secondary structure MAK, a computational tool kit for automated MITE analysis Target Explorer: an automated tool for the identification of new target genes for a specified set of transcription factors MultiPipMaker and supporting tools: alignments and analysis of multiple genomic DNA sequences OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling MATRAS: a program for protein 3D structure comparison MolSurfer: a macromolecular interface navigator ESEfinder: a web resource to identify exonic splicing enhancers Multiple sequence alignment with the Clustal series of programs EnteriX 2003: visualization tools for genome alignments of Enterobacteriaceae DNA analysis servers: plot.it, bend.it, model.it and IS ActionMap: a web-based software that automates loci assignments to framework maps POPS: a fast algorithm for solvent accessible surface areas at atomic and residue level MAVID multiple alignment server SEM (Symmetry Equivalent Molecules): a web-based GUI to generate and visualize the macromolecules Mfold web server for nucleic acid folding and hybridization prediction FrameD: a flexible program for quality check and gene prediction in prokaryotic genomes and noisy matured eukaryotic sequences Editorial ORFeus: detection of distant homology using sequence profiles and predicted secondary structure LOC3D: annotate sub-cellular localization for protein structures Dragon ERE Finder version 2: a tool for accurate detection and analysis of estrogen response elements in vertebrate genomes MGAlignIt: a web service for the alignment of mRNA/EST and genomic sequences FIE2: a program for the extraction of genomic DNA sequences around the start and translation initiation site of human genes UniqueProt: creating representative protein sequence sets REDUCE: an online tool for inferring cis-regulatory elements and transcriptional module activities from microarray data SSEP: secondary structural elements of proteins GlobPlot: exploring protein sequences for globularity and disorder SEARCHPKS: a program for detection and analysis of polyketide synthase domains INCLUSive: a web portal and service registry for microarray and regulatory sequence analysis The web server of IBM's Bioinformatics and Pattern Discovery group NEWT, a new taxonomy portal Motif3D: relating protein sequence motifs to 3D structure OntoBlast function: from sequence similarities directly to potential functional annotations by ontology terms GeneSilico protein structure prediction meta-server Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs AMIGene: Annotation of MIcrobial Genes SPA: simple web tool to assess statistical significance of DNA patterns NCI: a server to identify non-canonical interactions in protein structures PseudoViewer2: visualization of RNA pseudoknots of any type Tools for comparative protein structure modeling and analysis WU-Blast2 server at the European Bioinformatics Institute Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes SVM-Prot: web-based support vector machine software for functional classification of a protein from its primary sequence PSORT-B: improving protein subcellular localization prediction for Gram-negative bacteria CASTp: Computed Atlas of Surface Topography of proteins BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases Cluster-Buster: finding dense clusters of motifs in DNA sequences 3matrix and 3motif: a protein structure visualization system for conserved sequence motifs ESTAnnotator: a tool for high throughput EST annotation PARSESNP: a tool for the analysis of nucleotide polymorphisms Automated Gene Ontology annotation for anonymous sequence data SIC: a tool to detect short inverted segments in a biological sequence FootPrinter: a program designed for phylogenetic footprinting Signal search analysis server ExpressYourself: a modular platform for processing and visualizing microarray data Detection of reliable and unexpected protein fold predictions using 3D-Jury SIFT: predicting amino acid changes that affect protein function SWISS-MODEL: an automated protein homology-modeling server Tools for the automatic identification and classification of RNA base pairs JVirGel: calculation of virtual two-dimensional protein gels Swiss EMBnet node web server PROBEmer: a web-based software tool for selecting optimal DNA oligos Comprehensive quantitative analyses of the effects of promoter sequence elements on mRNA transcription YMF: a program for discovery of novel transcription factor binding sites by statistical overrepresentation Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate SiteSeer: visualisation and analysis of transcription factor binding sites in nucleotide sequences PromH: promoters identification using orthologous genomic sequences

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata