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Attributs	Valeurs
type	work Issue
Is Part Of	http://hub.abes.fr/oup/periodical/nar/2005/volume_33
has manifestation of work	http://hub.abes.fr/oup/periodical/nar/2005/volume_33/issue_13/m/web http://hub.abes.fr/oup/periodical/nar/2005/volume_33/issue_13/m/print
Date Copyrighted	2005
Rights	© The Author 2005. Published by Oxford University Press. All rights reserved © The Author 2005. Published by Oxford University Press. All rights reserved  The online version of this article has been published under an open access model. Users are entitled to use, reproduce, disseminate, or display the open access version of this article for non-commercial purposes provided that: the original authorship is properly and fully attributed; the Journal and Oxford University Press are attributed as the original place of publication with the correct citation details given; if an article is subsequently reproduced or disseminated not in its entirety but only in paor as a derivative work this must be clearly indicated. For commercial re-use, please contact © The Author 2005. Published by Oxford University Press. All rights reserved  The online version of this article has been published under an open access model. Users are entitled to use, reproduce, disseminate, or display the open access version of this article for non-commercial purposes provided that: the original authorship is properly and fully attributed; the Journal and Oxford University Press are attributed as the original place of publication with the correct citation details given; if an article is subsequently reproduced or disseminated not in its entirety but only in part or as a derivative work this must be clearly indicated. For commercial re-use, please contact
issue	13
Access Rights	open-access
is Is Part Of of	Topological constraints in nucleic acid hybridization kinetics miBLAST: scalable evaluation of a batch of nucleotide sequence queries with BLAST Human POL II promoter prediction: time series descriptors and machine learning Genomic rearrangements by LINE-1 insertion-mediated deletion in the human and chimpanzee lineages Specific binding of the methyl binding domain protein 2 at the BRCA1-NBR2 locus CisMols Analyzer: identification of compositionally similar cis-element clusters in ortholog conserved regions of coordinately expressed genes Assigning functions to genes: identification of S-phase expressed genes in Leishmania major based on post-transcriptional control elements Anti-HIV-1 activity of anti-TAR polyamide nucleic acid conjugated with various membrane transducing peptides Genome-wide selection of unique and valid oligonucleotides Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains Genome annotation errors in pathway databases due to semantic ambiguity in partial EC numbers Incorporation of non-nucleoside triphosphate analogues opposite to an abasic site by human DNA polymerases β and λ Structural and DNA-binding studies on the bovine antimicrobial peptide, indolicidin: evidence for multiple conformations involved in binding to membranes and DNA FAST DB: a website resource for the study of the expression regulation of human gene products The proliferating cell nuclear antigen regulates retinoic acid receptor transcriptional activity through direct protein-protein interaction The 5S rRNA maturase, ribonuclease M5, is a Toprim domain family member Induction of transcription within chromosomal DNA loops flanked by MAR elements causes an association of loop DNA with the nuclear matrix DNA repair factor XPC is modified by SUMO-1 and ubiquitin following UV irradiation Preferential binding of a G-quadruplex ligand to human chromosome ends Discovery of a novel restriction endonuclease by genome comparison and application of a wheat-germ-based cell-free translation assay: PabI (5′-GTA/C) from the hyperthermophilic archaeon Pyrococcus abyssi Minimal cross-recombination between wild-type and loxP511 sites in vivo facilitates truncating both ends of large DNA inserts in pBACe3.6 and related vectors SiteFinding-PCR: a simple and efficient PCR method for chromosome walking Determination of protein-DNA binding constants and specificities from statistical analyses of single molecules: MutS-DNA interactions Functional studies on the ATM intronic splicing processing element Length-dependent energetics of (CTG)n and (CAG)n trinucleotide repeats MAO: a Multiple Alignment Ontology for nucleic acid and protein sequences I-ApeI: a novel intron-encoded LAGLIDADG homing endonuclease from the archaeon, Aeropyrum pernix K1 Interplay between positive and negative activities that influence the role of Bicoid in transcription Cooperative binding of DNA and CBFβ to the Runt domain of the CBFα studied via MD simulations GDNF-inducible zinc finger protein 1 is a sequence-specific transcriptional repressor that binds to the HOXA10 gene regulatory region Solution structure of the DNA-binding domain of RPA from Saccharomyces cerevisiae and its interaction with single-stranded DNA and SV40 T antigen A host-guest approach for determining drug-DNA interactions: an example using netropsin Cloning and characterization of the Schizosaccharomyces pombe homologs of the human protein Translin and the Translin-associated protein TRAX Functional polarity is introduced by Dicer processing of short substrate RNAs Simultaneous detection of microsatellite repeats and SNPs in the macrophage migration inhibitory factor (MIF) gene by thin-film biosensor chips and application to rural field studies Maternal disruption of Ube3a leads to increased expression of Ube3a-ATS in trans Four new type I restriction enzymes identified in Escherichia coli clinical isolates Evaluation of multiple displacement amplification in a 5 cM STR genome-wide scan Transcription factor binding sites in the pol gene intragenic regulatory region of HIV-1 are important for virus infectivity A novel PCR strategy for high-efficiency, automated site-directed mutagenesis Characterization of zebrafish Rad52 and replication protein A for oligonucleotide-mediated mutagenesis Generation of subspecies level-specific microbial diagnostic microarrays using genes amplified from subtractive suppression hybridization as microarray probes sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes Uracil content of 16S rRNA of thermophilic and psychrophilic prokaryotes correlates inversely with their optimal growth temperatures Nucleotide exchange and excision technology (NExT) DNA shuffling: a robust method for DNA fragmentation and directed evolution Syntheses of 4′-thioribonucleosides and thermodynamic stability and crystal structure of RNA oligomers with incorporated 4′-thiocytosine Large-scale structural analysis of the core promoter in mammalian and plant genomes An Oct-1 binding site mediates activation of the gata2 promoter by BMP signaling Cell-type-specific transcriptomics in chimeric models using transcriptome-based masks The involvement of the aspartate triad of the active center in all catalytic activities of multisubunit RNA polymerase Identification of a novel gene encoding a flavin-dependent tRNA:m5U methyltransferase in bacteria—evolutionary implications Intercalator conjugates of pyrimidine locked nucleic acid-modified triplex-forming oligonucleotides: improving DNA binding properties and reaching cellular activities Contrasting effects of Elg1-RFC and Ctf18-RFC inactivation in the absence of fully functional RFC in fission yeast An atypical RNA pseudoknot stimulator and an upstream attenuation signal for −1 ribosomal frameshifting of SARS coronavirus An ultrasensitive photoelectrochemical nucleic acid biosensor

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