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Durbin R.
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is
Author
of
WormBase: new content and better access
Fast and accurate long-read alignment with Burrows-Wheeler transform
QuickTree: building huge Neighbour-Joining trees ofprotein sequences
The Sequence Alignment/Map format and SAMtools
Copy number variant detection in inbred strains from short read sequence data
TreeFam: a curated database of phylogenetic trees of animal gene families
Pfam: clans, web tools and services
TreeFam: 2008 Update
Improved techniques for the identification of pseudogenes
The Pfam Protein Families Database
WormBase: a multi-species resource for nematode biology and genomics
Efficient construction of an assembly string graph using the FM-index
Tc7, a Tc1-hitch hiking transposon in Caenorhabditis elegans
WormBase: better software, richer content
Ensembl 2007
WormBase 2007
Genomix: a method for combining gene-finders' predictions, which uses evolutionary conservation of sequence and intron-exon structure
WormBase: a comprehensive data resource for Caenorhabditis biology and genomics
Pfam: Multiple sequence alignments and HMM-profiles of protein domains
The InterPro database, an integrated documentation resource for protein families, domains and functional sites
The InterPro Database, 2003 brings increased coverage and new features
The Ensembl genome database project
WormBase: a cross-species database for comparative genomics
InterPro, progress and status in 2005
Ensembl 2002: accommodating comparative genomics
Gene structure conservation aids similarity based gene prediction
Ensembl 2006
WormBase: network access to the genome and biology of Caenorhabditis elegans
InterPro—an integrated documentation resource for protein families, domains and functional sites
Fast and accurate short read alignment with Burrows-Wheeler transform
Ensembl 2005
The Pfam Protein Families Database
Ensembl 2008
Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins
Ensembl 2004
Comparative ab initio prediction of genestructures using pair HMMs
RNA sequence analysis using covariance models
A probabilistic model of 3′ end formation in Caenorhabditis elegans
The Pfam protein families database
Ensembl 2009
Tree-based maximal likelihood substitution matrices and hidden Markov models
Alternative Linked Data Documents:
ODE
Content Formats:
RDF
ODATA
Microdata
